Scaffold Ga0116699_1049216

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

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Scaffold Ga0116699_1049216

Scaffold Ga0116699_1049216

Overview

Basic Information
Taxon OID	3300013948 Open in IMG/M
Scaffold ID	Ga0116699_1049216 Open in IMG/M
Source Dataset Name	Coral microbial communities from a home aquarium in Belgium - AM-T0-control A
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center	University of Mons
Sequencing Status	Permanent Draft

Scaffold Components
Scaffold Length (bps)	647
Total Scaffold Genes	2 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	1 (50.00%)
Novel Protein Genes	2 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	1 (50.00%)
Associated Families	2

Taxonomy
Not Available	(Source: )

Ecosystem & Geography

Source Dataset Ecosystem
Host-Associated → Invertebrates → Cnidaria → Coral → Unclassified → Coral Tissue → Coral Microbial Communities From Home Aquarium In Belgium And Reunion Island, France

Source Dataset Sampling Location
Location Name	Belgium: Mons, Walloon Region
Coordinates	Lat. (^o)	50.45	Long. (^o)	3.93	Alt. (m)		Depth (m)
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F014704	Metagenome / Metatranscriptome	260	Y
F084979	Metagenome / Metatranscriptome	111	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0116699_10492161	F014704	N/A	IVMTTLDEVSNKTKVPDEFILHSVLLDCFTAELDE*
Ga0116699_10492162	F084979	GGAG	MARRFAEISEEEIEEESFYPSDLVNTKTTIPRRVGEEWWI*

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