Scaffold Ga0116707_1004837

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

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Scaffold Ga0116707_1004837

Scaffold Ga0116707_1004837

Overview

Basic Information
Taxon OID	3300014041 Open in IMG/M
Scaffold ID	Ga0116707_1004837 Open in IMG/M
Source Dataset Name	Coral microbial communities from a home aquarium in Belgium - PD-TF-control B
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center	University of Mons
Sequencing Status	Permanent Draft

Scaffold Components
Scaffold Length (bps)	1045
Total Scaffold Genes	2 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	1 (50.00%)
Novel Protein Genes	1 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	0 (0.00%)
Associated Families	1

Taxonomy
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	(Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem
Host-Associated → Invertebrates → Cnidaria → Coral → Unclassified → Coral Tissue → Coral Microbial Communities From Home Aquarium In Belgium And Reunion Island, France

Source Dataset Sampling Location
Location Name	Belgium: Mons, Walloon Region
Coordinates	Lat. (^o)	50.45	Long. (^o)	3.93	Alt. (m)		Depth (m)
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F021306	Metagenome / Metatranscriptome	219	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0116707_10048371	F021306	N/A	MAGMMGAMGGMGDGMKEAAKKAVEDEIAAKAPGSIKPFFPCLGGPVPTVETCMCMVPADQQDSVKQAIEKYKSL*

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