Basic Information | |
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Taxon OID | 3300014047 Open in IMG/M |
Scaffold ID | Ga0120381_1071433 Open in IMG/M |
Source Dataset Name | Sheep rumen microbial communities from Wyoming, USA - O_aries_Forg_1003 |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | University of Missouri |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 878 |
Total Scaffold Genes | 4 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 3 (75.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Caldibacillus → Caldibacillus debilis → Caldibacillus debilis GB1 | (Source: UniRef50) |
Source Dataset Ecosystem |
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Host-Associated → Mammals → Digestive System → Foregut → Rumen → Sheep Rumen → Ruminant Gut Microbial Communities From Various Locations In Usa |
Source Dataset Sampling Location | ||||||||
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Location Name | USA: Wyoming | |||||||
Coordinates | Lat. (o) | 41.314168 | Long. (o) | -105.584589 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F048702 | Metagenome / Metatranscriptome | 147 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0120381_10714332 | F048702 | AGGAG | MDKRERKMDAETLQQFLAFRKRANRVPSKKGKGSYDRKGFKKGRDAE* |
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