Basic Information | |
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Taxon OID | 3300014572 Open in IMG/M |
Scaffold ID | Ga0134457_1000470 Open in IMG/M |
Source Dataset Name | Human fecal microbial communities from obese patients in Germany - AS65_6 |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | University of Hohenheim |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 22916 |
Total Scaffold Genes | 33 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 25 (75.76%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae | (Source: IMG/M) |
Source Dataset Ecosystem |
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Host-Associated → Human → Digestive System → Large Intestine → Fecal → Human Fecal → Human Fecal Microbial Communities From Obese Patients In Germany |
Source Dataset Sampling Location | ||||||||
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Location Name | Germany | |||||||
Coordinates | Lat. (o) | Long. (o) | Alt. (m) | Depth (m) | Location on Map | |||
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
---|---|---|---|
F068855 | Metagenome | 124 | N |
Protein ID | Family | RBS | Sequence |
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Ga0134457_100047018 | F068855 | GGTGG | VPTISKCPSSSVPTVEAQEPQVRKILAPQGLQAEKERENANVQNAGWLHSFDADYHYRGSDLHYHVNVSAALSEGGAVW* |
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