Basic Information | |
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Taxon OID | 3300017826 Open in IMG/M |
Scaffold ID | Ga0189785_1499 Open in IMG/M |
Source Dataset Name | Saline water viral communities from hypersaline Lake Retba, Senegal ? P6 |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | GATC-Biotech AG, Konstanz, Germany |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 1204 |
Total Scaffold Genes | 5 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 3 (60.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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Not Available | (Source: ) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Unclassified → Saline Water → Archevir - Metagenome And Diversity Of Hyperhalophilic Archaeoviruses |
Source Dataset Sampling Location | ||||||||
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Location Name | Lake Retba, Senegal | |||||||
Coordinates | Lat. (o) | 14.8388 | Long. (o) | -17.2341 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F074460 | Metagenome | 119 | N |
Protein ID | Family | RBS | Sequence |
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Ga0189785_14993 | F074460 | AGGTGG | MYYHCPHCRTWRSDTYVRIDPRTRIPQCEYCDEFVNGRLGDAAYKELLKKHALEVPPPGE |
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