Basic Information | |
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Taxon OID | 3300018588 Open in IMG/M |
Scaffold ID | Ga0193141_1008824 Open in IMG/M |
Source Dataset Name | Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_022 - TARA_A100000538 (ERX1782191-ERR1712140) |
Source Dataset Category | Metatranscriptome |
Source Dataset Use Policy | Open |
Sequencing Center | Canada's Michael Smith Genome Sciences Centre |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 742 |
Total Scaffold Genes | 1 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Eukaryota | (Source: UniRef50) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine → Marine Viral And Eukaryotic Protist Communities Collected From Different Water Depths During Tara Oceans Survey |
Source Dataset Sampling Location | ||||||||
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Location Name | Mediterranean Sea: TARA_022 | |||||||
Coordinates | Lat. (o) | 39.814 | Long. (o) | 17.4138 | Alt. (m) | Depth (m) | 5 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F002228 | Metatranscriptome | 580 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0193141_10088241 | F002228 | N/A | IDCQEDKIVKCPGEGPRYGDFKCTHDKTHRVCAKLVDNPTSCKELSWNENGGSFWDITGQQKWNWKDKICNEPNPGDSWCICMWATANLIKNVGCDNVHIHCEATGVNHVLQSYTDGGVDLQVAKSCLQKKCTKQDNGGFVNA |
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