Basic Information | |
---|---|
Taxon OID | 3300018798 Open in IMG/M |
Scaffold ID | Ga0193283_1066380 Open in IMG/M |
Source Dataset Name | Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_100 - TARA_N000001604 (ERX1789622-ERR1719156) |
Source Dataset Category | Metatranscriptome |
Source Dataset Use Policy | Open |
Sequencing Center | Canada's Michael Smith Genome Sciences Centre |
Sequencing Status | Permanent Draft |
Scaffold Components | |
---|---|
Scaffold Length (bps) | 556 |
Total Scaffold Genes | 1 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
---|---|
All Organisms → cellular organisms → Eukaryota → Sar | (Source: UniRef50) |
Source Dataset Ecosystem |
---|
Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine → Marine Viral And Eukaryotic Protist Communities Collected From Different Water Depths During Tara Oceans Survey |
Source Dataset Sampling Location | ||||||||
---|---|---|---|---|---|---|---|---|
Location Name | South Pacific Ocean: TARA_100 | |||||||
Coordinates | Lat. (o) | -13.0023 | Long. (o) | -95.9759 | Alt. (m) | Depth (m) | 5 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
---|---|---|---|
F068401 | Metatranscriptome | 124 | N |
Protein ID | Family | RBS | Sequence |
---|---|---|---|
Ga0193283_10663801 | F068401 | GAG | MALYKAAVLVLALASGASALGMKGLKERLDINQKVYIDGQPVLGDGTGVGALNQCRAFADHFVSDPRKPDVKVCGTGVKMTVYLLGRCGMKSTGQALSASGMAHTWTVGACDKGLGAQTCKEQGPGVDLRFGASQSYKIEQC |
⦗Top⦘ |