Basic Information | |
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Taxon OID | 3300018814 Open in IMG/M |
Scaffold ID | Ga0193075_1078629 Open in IMG/M |
Source Dataset Name | Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_038 - TARA_N000000047 (ERX1789515-ERR1719274) |
Source Dataset Category | Metatranscriptome |
Source Dataset Use Policy | Open |
Sequencing Center | Canada's Michael Smith Genome Sciences Centre |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 583 |
Total Scaffold Genes | 1 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Eukaryota → Sar | (Source: UniRef50) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine → Marine Viral And Eukaryotic Protist Communities Collected From Different Water Depths During Tara Oceans Survey |
Source Dataset Sampling Location | ||||||||
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Location Name | Indian Ocean: TARA_038 | |||||||
Coordinates | Lat. (o) | 19.0284 | Long. (o) | 64.5126 | Alt. (m) | Depth (m) | 25 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F068401 | Metatranscriptome | 124 | N |
Protein ID | Family | RBS | Sequence |
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Ga0193075_10786291 | F068401 | GAG | MALCKASVLVLVLASGASALGVKGSKERLDINQKVYIDGQPVLGDGTGNGALNQCRGFADHFVSDPRKPDVKVCGTGVKMTVYLLGRCGLKSTGQALSASGMARTWTVGSCDKGAAASTCVETGPSVDLRLGASQSYKIEQC |
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