Basic Information | |
---|---|
Taxon OID | 3300019006 Open in IMG/M |
Scaffold ID | Ga0193154_10275839 Open in IMG/M |
Source Dataset Name | Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_025 - TARA_A100000394 (ERX1782339-ERR1711936) |
Source Dataset Category | Metatranscriptome |
Source Dataset Use Policy | Open |
Sequencing Center | Canada's Michael Smith Genome Sciences Centre |
Sequencing Status | Permanent Draft |
Scaffold Components | |
---|---|
Scaffold Length (bps) | 564 |
Total Scaffold Genes | 1 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
---|---|
All Organisms → cellular organisms → Eukaryota | (Source: Euk_MAG) |
Source Dataset Ecosystem |
---|
Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine → Marine Viral And Eukaryotic Protist Communities Collected From Different Water Depths During Tara Oceans Survey |
Source Dataset Sampling Location | ||||||||
---|---|---|---|---|---|---|---|---|
Location Name | Mediterranean Sea: TARA_025 | |||||||
Coordinates | Lat. (o) | 39.3888 | Long. (o) | 19.3905 | Alt. (m) | Depth (m) | 5 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
---|---|---|---|
F063313 | Metatranscriptome | 129 | N |
Protein ID | Family | RBS | Sequence |
---|---|---|---|
Ga0193154_102758391 | F063313 | N/A | TWGDKMGCCNPEGLKHLAGIGIAKWQALIGGSLFTTGLVMFISGIVVLAADCPSVSKPWVLLVYGLVTMVTWVWPLWAGIDRIRAARNGGRPNNLVQGLVHLASMDGAYTWWFAGEIIRNYSDSKGLGGCEQGWDLLCLVLLSIRFVFLGFYVIFWITALIYFGCIKKT |
⦗Top⦘ |