Basic Information | |
---|---|
Taxon OID | 3300019014 Open in IMG/M |
Scaffold ID | Ga0193299_10173238 Open in IMG/M |
Source Dataset Name | Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_100 - TARA_N000001620 (ERX1789400-ERR1719204) |
Source Dataset Category | Metatranscriptome |
Source Dataset Use Policy | Open |
Sequencing Center | Canada's Michael Smith Genome Sciences Centre |
Sequencing Status | Permanent Draft |
Scaffold Components | |
---|---|
Scaffold Length (bps) | 887 |
Total Scaffold Genes | 1 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
---|---|
Not Available | (Source: ) |
Source Dataset Ecosystem |
---|
Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine → Marine Viral And Eukaryotic Protist Communities Collected From Different Water Depths During Tara Oceans Survey |
Source Dataset Sampling Location | ||||||||
---|---|---|---|---|---|---|---|---|
Location Name | South Pacific Ocean: TARA_100 | |||||||
Coordinates | Lat. (o) | -12.9359 | Long. (o) | -96.0413 | Alt. (m) | Depth (m) | 5 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
---|---|---|---|
F025211 | Metatranscriptome | 202 | Y |
Protein ID | Family | RBS | Sequence |
---|---|---|---|
Ga0193299_101732381 | F025211 | N/A | RRSENTTKPHAMSLTRVLRNGKVSTRLARALSGEVAMELSDIERAAGQGRTTPWHYTVPKDWKDTRTDLQKSQHNGETPDYDKKKGPARVAGRMKGCDIDIEGIKKKVDSMKDEDGVFIEPHCRELPSMMFNDVIVNYHFDYIGLKSPPFGDAEISEIESKTTITRDNIHHSRSDWMNLEPDMIDYQTMVEDIQEMYKKGVKYRTINMWIDYVTGSGSLYGESIRNLNWTRIDS |
⦗Top⦘ |