Basic Information | |
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Taxon OID | 3300020259 Open in IMG/M |
Scaffold ID | Ga0211633_1021999 Open in IMG/M |
Source Dataset Name | Marine microbial communities from Tara Oceans - TARA_B100000482 (ERX556041-ERR599103) |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | CEA Genoscope |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 1120 |
Total Scaffold Genes | 3 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Novel Protein Genes | 2 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 2 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium | (Source: UniRef50) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine → Marine Viral And Eukaryotic Protist Communities Collected From Different Water Depths During Tara Oceans Survey |
Source Dataset Sampling Location | ||||||||
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Location Name | TARA_068 | |||||||
Coordinates | Lat. (o) | -31.0136 | Long. (o) | 4.6932 | Alt. (m) | Depth (m) | 50 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F004325 | Metagenome / Metatranscriptome | 443 | Y |
F027869 | Metagenome | 193 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0211633_10219991 | F004325 | N/A | PFYFLIMKHKKKASTSDKADSFLNMIGTAGGPIGAPQLVGFGGTDTMSQLAAGNRDEYANIRMKEGDTRVVEGAKMPSDLDASYLKLNLPGSPLPANGLLAPQNLRAAEQTQDVIRSQEQMFLAKFIPAAGLMQLPVGQPPLESKKGKK |
Ga0211633_10219992 | F027869 | N/A | MEHAKAKKAKSKAEKALTQMMMEAEMAKASEPDLQPEDGYINPMGRIGVVRPTTYSLTNQLDGTTTQSVINPET |
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