Basic Information | |
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Taxon OID | 3300020312 Open in IMG/M |
Scaffold ID | Ga0211542_1015323 Open in IMG/M |
Source Dataset Name | Marine microbial communities from Tara Oceans - TARA_B100000287 (ERX556125-ERR598977) |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | CEA Genoscope |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 1704 |
Total Scaffold Genes | 4 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 2 (50.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria | (Source: IMG/M) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine → Marine Microbial Communities From Tara Oceans |
Source Dataset Sampling Location | ||||||||
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Location Name | TARA_041 | |||||||
Coordinates | Lat. (o) | 14.5375 | Long. (o) | 70.0244 | Alt. (m) | Depth (m) | 60 | Location on Map |
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Family | Category | Number of Sequences | 3D Structure? |
---|---|---|---|
F007801 | Metagenome / Metatranscriptome | 344 | Y |
Protein ID | Family | RBS | Sequence |
---|---|---|---|
Ga0211542_10153233 | F007801 | AGGAG | MAIHDLTKKTRASTGQRVIPLGPVDNTMRVIKLEKRLNDQEQKLDKILNLLQHGNNLPNTDKQSS |
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