Basic Information | |
---|---|
Taxon OID | 3300020371 Open in IMG/M |
Scaffold ID | Ga0211500_1001421 Open in IMG/M |
Source Dataset Name | Marine microbial communities from Tara Oceans - TARA_B100000003 (ERX555978-ERR598991) |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | CEA Genoscope |
Sequencing Status | Permanent Draft |
Scaffold Components | |
---|---|
Scaffold Length (bps) | 9446 |
Total Scaffold Genes | 8 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 4 (50.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
---|---|
All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Mamiellophyceae → Mamiellales → Bathycoccaceae → Ostreococcus → unclassified Ostreococcus → Ostreococcus sp. 'lucimarinus' | (Source: IMG/M) |
Source Dataset Ecosystem |
---|
Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine → Marine Viral And Eukaryotic Protist Communities Collected From Different Water Depths During Tara Oceans Survey |
Source Dataset Sampling Location | ||||||||
---|---|---|---|---|---|---|---|---|
Location Name | TARA_034 | |||||||
Coordinates | Lat. (o) | 18.4017 | Long. (o) | 39.855 | Alt. (m) | Depth (m) | 5 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
---|---|---|---|
F087146 | Metagenome / Metatranscriptome | 110 | N |
Protein ID | Family | RBS | Sequence |
---|---|---|---|
Ga0211500_10014218 | F087146 | N/A | ESTPLVIDASETSSIAYGDVHRPRRRRSAMTSVAAVGVISFSVGILLILAGGRSSDEHARVGGILNWVFRGRVRPEVTFTLDASWIDQRLRAANPDFFTSPISDGFILRHNYNSHLFFPRKNMVKMTRIGLRKWTVTTRDVNYEYGFALGNEAGEILREIGPWVTTKQHGPKSGNGEFMDACTVTFWPYRNRLIPQKPNAAPGPLNVTACFASCTKTCELPNAPTPLASLDASQYTGGNTWGNAQISCNLGSQTTYNSTMNGMYINGNRQSVITCPYEIGPARYPNLTMEVVFQLDTTYDPTASYGWIFGHDDGGYDRSFIISDTRFGGGIGSGIGAVYDSGAATPSNGVWHHGLAVFRQGIVDGSYTALDGAISPVKATANNNEGEPDFTVGGLANDFGFPHEMKGWIRYFNFYDGALDESQIEAMYVRNTPWP |
⦗Top⦘ |