Basic Information | |
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Taxon OID | 3300020430 Open in IMG/M |
Scaffold ID | Ga0211622_10005765 Open in IMG/M |
Source Dataset Name | Marine microbial communities from Tara Oceans - TARA_B100000683 (ERX556126-ERR599160) |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | CEA Genoscope |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 7885 |
Total Scaffold Genes | 12 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 5 (41.67%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Archaea | (Source: UniRef50) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine → Marine Microbial Communities From Tara Oceans |
Source Dataset Sampling Location | ||||||||
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Location Name | TARA_123 | |||||||
Coordinates | Lat. (o) | -8.8951 | Long. (o) | -140.3174 | Alt. (m) | Depth (m) | 5 | Location on Map |
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Family | Category | Number of Sequences | 3D Structure? |
---|---|---|---|
F033460 | Metagenome | 177 | N |
Protein ID | Family | RBS | Sequence |
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Ga0211622_100057655 | F033460 | N/A | MLETEISEGQHTSVHFCFDKFDGLLDKGLDLSKYELSITDPRTHFHVHLLNRDSDYIEKNVLDAYDINVDFPVIFFGRELPYRDGFRCAFHLETYKKFKSVLFRETIKTIQLFKGNFIDIILAGDFTQDGKFIDNSINIEIIPKLENYKQVGEILDRNFNIPKLNYFYDSFICYEREDFAWHIKIKLHQDSKPIVKFYRTNPNNPYLHFKYYDN |
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