Basic Information | |
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Taxon OID | 3300020477 Open in IMG/M |
Scaffold ID | Ga0211585_10023891 Open in IMG/M |
Source Dataset Name | Marine microbial communities from Tara Oceans - TARA_B100001123 (ERX555935-ERR599156) |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | CEA Genoscope |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 4984 |
Total Scaffold Genes | 13 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 9 (69.23%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56 | (Source: UniRef50) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine → Marine Microbial Communities From Tara Oceans |
Source Dataset Sampling Location | ||||||||
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Location Name | TARA_125 | |||||||
Coordinates | Lat. (o) | -8.9103 | Long. (o) | -142.5767 | Alt. (m) | Depth (m) | 140 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F094391 | Metagenome | 106 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0211585_100238913 | F094391 | GGAG | MKKDVSYKVPKISNNTDKGKWLNSFVGKFFTGSHNYNFDGKIHVKLKTTQFKMNNDLSVMVAWFKNLKKLKQDQFVGEVFKAQLYRNNLKEAA |
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