Basic Information | |
---|---|
Taxon OID | 3300021368 Open in IMG/M |
Scaffold ID | Ga0213860_10000023 Open in IMG/M |
Source Dataset Name | Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO550 |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
---|---|
Scaffold Length (bps) | 55157 |
Total Scaffold Genes | 54 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 25 (46.30%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
---|---|
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae | (Source: IMG/M) |
Source Dataset Ecosystem |
---|
Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater → Coastal Seawater Microbial Communities From Pivers Island, North Carolina, United States |
Source Dataset Sampling Location | ||||||||
---|---|---|---|---|---|---|---|---|
Location Name | USA: North Carolina | |||||||
Coordinates | Lat. (o) | 34.7181 | Long. (o) | -76.6707 | Alt. (m) | Depth (m) | 1 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
---|---|---|---|
F085235 | Metagenome | 111 | Y |
Protein ID | Family | RBS | Sequence |
---|---|---|---|
Ga0213860_1000002352 | F085235 | GAG | MEADLTPERETLLKLLEAANIEVIQNADICRERGNRYAGFTISTPYNETIKVIICTDALNEHAKGYRYKLELNRTVDHEALHAAQFCKHGYSPGSVSDDWTTDSEMEAVSYEDRPQAVGDQLIKFCF |
⦗Top⦘ |