Basic Information | |
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Taxon OID | 3300021871 Open in IMG/M |
Scaffold ID | Ga0063129_101237 Open in IMG/M |
Source Dataset Name | Metatranscriptome of Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Stratiphyt 2011 S2 C18 B9 (Eukaryote Community Metatranscriptome) |
Source Dataset Category | Metatranscriptome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 1047 |
Total Scaffold Genes | 1 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Eukaryota | (Source: Euk_MAG) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine → Marine Eukaryotic Phytoplankton Communities From The Norwegian Sea, Arctic And Atlantic Ocean |
Source Dataset Sampling Location | ||||||||
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Location Name | Atlantic Ocean | |||||||
Coordinates | Lat. (o) | 31.219323 | Long. (o) | -14.870404 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F038527 | Metatranscriptome | 165 | N |
Protein ID | Family | RBS | Sequence |
---|---|---|---|
Ga0063129_1012371 | F038527 | N/A | FTTSPAMTSFGVLVAVALLCTLQLERVSCGARPRPRPIFVQPQAEARTRVVTEPLVDGIHSVERFVGDLFSPIFGGPVASGSNDKDPKDSYGIPSYTSYIAEPPKPKKKEKIPCGGYGYANRRSFGSGVLNGGKKEDDCGVYAEAENGFGFQENCEYIHETIFKTKYKTECSKTYSTQCQTSYKTECTTSLNQECRTEYKEECSYADSEECITVDRPSYHQVCDTEYVQDCDGGGYKNTYEAPPPCATVPKQVCRQVAEFHQETECTNVPKKSCVTSPREVCGDVPKQDCKLVPTSTNCKDIPEKLCRQRAYQYPESITRQVCGLGPSQPSGGKKGKGKKVRK |
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