Basic Information | |
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Taxon OID | 3300021937 Open in IMG/M |
Scaffold ID | Ga0063754_1107601 Open in IMG/M |
Source Dataset Name | Marine eukaryotic phytoplankton communities from the South Atlantic Ocean - 30m ANT-15 Euk ARK-20-2 (Eukaryote Community Metatranscriptome) |
Source Dataset Category | Metatranscriptome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 505 |
Total Scaffold Genes | 1 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Eukaryota | (Source: Euk_MAG) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine → Marine Eukaryotic Phytoplankton Communities From The Norwegian Sea, Arctic And Atlantic Ocean |
Source Dataset Sampling Location | ||||||||
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Location Name | South Atlantic Ocean | |||||||
Coordinates | Lat. (o) | 78.8697 | Long. (o) | 8.1122 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F016491 | Metagenome / Metatranscriptome | 246 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0063754_11076011 | F016491 | N/A | TDLDKLPPPAPAVMCTMILAVFFFAIQLVIAVCRSYAEFTGVEFPKTVMTMNAAATTVEFAPMLSILFLAARMRALQHDGQPQRWAQDCMFAATYAMCTTTLLAIVVPVVMGGSMKTDPITKENTFEVPNPTLGYCLVALRFICMLGFYGGAVGVAYSIFVFEAPAGP |
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