Basic Information | |
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Taxon OID | 3300022156 Open in IMG/M |
Scaffold ID | Ga0213934_1028728 Open in IMG/M |
Source Dataset Name | Metatranscriptome of freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 29-17 MT (Metagenome Metatranscriptome) |
Source Dataset Category | Metatranscriptome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 747 |
Total Scaffold Genes | 1 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
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Not Available | (Source: ) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Freshwater → Creek → Unclassified → Freshwater → Freshwater Microbial Communities From Mcnutts Creek, Athens, Georgia, United States |
Source Dataset Sampling Location | ||||||||
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Location Name | USA: Georgia | |||||||
Coordinates | Lat. (o) | 33.9263 | Long. (o) | -83.4268 | Alt. (m) | Depth (m) | 0 | Location on Map |
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Family | Category | Number of Sequences | 3D Structure? |
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F052619 | Metagenome / Metatranscriptome | 142 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0213934_10287281 | F052619 | N/A | PINSQTDISMRCPVFRPVYKFSRMVEGVFDITTNGIIAALGSFDFKLNSLPTYLDFVNLFDMYRIVSIEVLYQPEYTELTDAALVSNAVNVYFNTVIDLTDVTAPANVDEVLAYQQCLSTPITKQHARKWRPTILMGGVTPCSCWLPTSNASEKHYALKYGIPPTGVAMTFRSRVRYHLEFANVN |
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