Basic Information | |
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Taxon OID | 3300022222 Open in IMG/M |
Scaffold ID | Ga0226658_10407129 Open in IMG/M |
Source Dataset Name | Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.BULKMAT1 (v2) |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 608 |
Total Scaffold Genes | 1 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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Not Available | (Source: ) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Microbial Mat → Freshwater Microbial Mat Bacterial Communities From Lake Vanda, Mcmurdo Dry Valleys, Antarctica |
Source Dataset Sampling Location | ||||||||
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Location Name | Antarctica: Lake Vanda, McMurdo Dry Valleys | |||||||
Coordinates | Lat. (o) | -77.5281 | Long. (o) | 161.59 | Alt. (m) | Depth (m) | 19 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F013273 | Metagenome / Metatranscriptome | 272 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0226658_104071291 | F013273 | GGAG | LTLDAPLLLIDTMSDRKTSKEIQAEIDVLTDQLAATLRLEIADLTRQAEEGEARYQALLRKMVGRRIVITKKDDPLYGMEAVITGPRGKSKKPMYWWFRTTTGIEAYKAKTSFKLLPIDEEEEA |
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