Basic Information | |
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Taxon OID | 3300022553 Open in IMG/M |
Scaffold ID | Ga0212124_10000190 Open in IMG/M |
Source Dataset Name | Powell_combined assembly |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 56983 |
Total Scaffold Genes | 50 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 40 (80.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria → Proteobacteria | (Source: IMG/M) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater → Bacterial And Archaeal Communities From Various Locations To Study Microbial Dark Matter (Phase Ii) |
Source Dataset Sampling Location | ||||||||
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Location Name | Canada: British Columbia | |||||||
Coordinates | Lat. (o) | 50.0621 | Long. (o) | -124.7214 | Alt. (m) | Depth (m) | 150 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
---|---|---|---|
F068996 | Metagenome / Metatranscriptome | 124 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0212124_1000019023 | F068996 | GAGG | MWYPRKEVGTMGYMVIGIAYIVLAVVAAMKPRAGNA |
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