Basic Information | |
---|---|
Taxon OID | 3300023300 Open in IMG/M |
Scaffold ID | Ga0256702_11551278 Open in IMG/M |
Source Dataset Name | Food waste microbial community from Durham, Ontario, Canada. Combined Assembly of Gp0238881, Gp0242100 |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | University of Toronto |
Sequencing Status | Permanent Draft |
Scaffold Components | |
---|---|
Scaffold Length (bps) | 3936 |
Total Scaffold Genes | 4 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 1 (25.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
---|---|
Not Available | (Source: ) |
Source Dataset Ecosystem |
---|
Engineered → Bioreactor → Aerobic → Unclassified → Unclassified → Food Waste → Metagenomes From Anaerobic Digester Of Solid Waste |
Source Dataset Sampling Location | ||||||||
---|---|---|---|---|---|---|---|---|
Location Name | Durham, Ontario, Canada | |||||||
Coordinates | Lat. (o) | 44.1763 | Long. (o) | -80.8185 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
---|---|---|---|
F004001 | Metagenome | 457 | Y |
Protein ID | Family | RBS | Sequence |
---|---|---|---|
Ga0256702_115512781 | F004001 | N/A | REVVEPLFLEVFKNHVDVALRDMVSGHGGGRLTVGLENLRGPFQP |
⦗Top⦘ |