Basic Information | |
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Taxon OID | 3300025270 Open in IMG/M |
Scaffold ID | Ga0208813_1052023 Open in IMG/M |
Source Dataset Name | Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_904 (SPAdes) |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 901 |
Total Scaffold Genes | 3 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 1 (33.33%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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Not Available | (Source: ) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean → Deep Ocean Microbial Communities From The Global Malaspina Expedition |
Source Dataset Sampling Location | ||||||||
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Location Name | Mediterranean Sea | |||||||
Coordinates | Lat. (o) | 43.49 | Long. (o) | 7.9 | Alt. (m) | Depth (m) | 2455 | Location on Map |
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Family | Category | Number of Sequences | 3D Structure? |
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F088727 | Metagenome / Metatranscriptome | 109 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0208813_10520232 | F088727 | GGAG | VADIIDIGTTPDDSPLKTGDMRRTYNQSKCGKGYKNVKGKCVKIKEGK |
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