Basic Information | |
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Taxon OID | 3300025296 Open in IMG/M |
Scaffold ID | Ga0208316_1016631 Open in IMG/M |
Source Dataset Name | Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_231 (SPAdes) |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 1991 |
Total Scaffold Genes | 7 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 3 (42.86%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → Viruses → Predicted Viral | (Source: DeepVirFinder) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean → Deep Ocean Microbial Communities From The Global Malaspina Expedition |
Source Dataset Sampling Location | ||||||||
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Location Name | Mediterranean Sea | |||||||
Coordinates | Lat. (o) | 38.48 | Long. (o) | 10.16 | Alt. (m) | Depth (m) | 2304 | Location on Map |
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Family | Category | Number of Sequences | 3D Structure? |
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F062167 | Metagenome | 131 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0208316_10166311 | F062167 | N/A | VVRIETIVERSERELCKLNSRTSKLEGWKSWMIGGMAGLGLVTTLIGIGVL |
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