Basic Information | |
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Taxon OID | 3300025371 Open in IMG/M |
Scaffold ID | Ga0209224_1007473 Open in IMG/M |
Source Dataset Name | Hypoxic/sulfidic aquatic microbial communities from Monarch Geyser, Yellowstone National Park, USA - MG (SPAdes) |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 1941 |
Total Scaffold Genes | 4 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 2 (50.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
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Not Available | (Source: ) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Non-Marine Saline And Alkaline → Unclassified → Unclassified → Hypoxic/Sulfidic Aquatic → Saline, Thermophilic Phototrophic And Chemotrophic Mat Microbial Communities From Various Locations In Usa And Mexico |
Source Dataset Sampling Location | ||||||||
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Location Name | Monarch Geyser, Yellowstone National Park, Wyoming, USA | |||||||
Coordinates | Lat. (o) | 44.376 | Long. (o) | -110.69 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F058287 | Metagenome | 135 | N |
Protein ID | Family | RBS | Sequence |
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Ga0209224_10074734 | F058287 | N/A | MSSIKFYSKLIDEICLLTRNLYTLFLESQMEPIRALSGFLLLKYTGIIIKLLVALANDEVPPMAEKTSELELSKIKEPRDRFSDVCWLIVNMFKLASITQDKQKRNELLLLLNRAENIYLDLVLSAILHEGVDNDKVDEELTKIKEELQEVIKV |
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