Basic Information | |
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Taxon OID | 3300025541 Open in IMG/M |
Scaffold ID | Ga0207790_1083482 Open in IMG/M |
Source Dataset Name | High solid enriched microbial communities from the Joint BioEnergy Institute, USA - SP1-4-D (SPAdes) |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 528 |
Total Scaffold Genes | 1 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fagales → Fagaceae → Quercus | (Source: UniRef50) |
Source Dataset Ecosystem |
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Engineered → Lab Enrichment → Defined Media → Unclassified → Unclassified → Ionic Liquid And High Solid Enriched → Ionic Liquid And High Solid Enriched Microbial Communities From The Joint Bioenergy Institute, California, Usa |
Source Dataset Sampling Location | ||||||||
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Location Name | Joint BioEnergy Institute, California, USA | |||||||
Coordinates | Lat. (o) | 38.5402 | Long. (o) | -121.75 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
---|---|---|---|
F031319 | Metagenome | 182 | Y |
Protein ID | Family | RBS | Sequence |
---|---|---|---|
Ga0207790_10834821 | F031319 | GGA | MYSDRYWEMFNEIDSDFDDVAISTFKVGLPAKHGLRKSLTGKPITSVRQLMGRIDKYKRVEEDQQQGKGKAKVI |
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