Basic Information | |
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Taxon OID | 3300025546 Open in IMG/M |
Scaffold ID | Ga0209225_1011750 Open in IMG/M |
Source Dataset Name | Sulfidic aquatic microbial communities from Washburn Spring, Yellowstone National Park, USA - WS (SPAdes) |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 5127 |
Total Scaffold Genes | 12 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 10 (83.33%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon | (Source: UniRef50) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Non-Marine Saline And Alkaline → Alkaline → Unclassified → Sulfidic Aquatic → Saline, Thermophilic Phototrophic And Chemotrophic Mat Microbial Communities From Various Locations In Usa And Mexico |
Source Dataset Sampling Location | ||||||||
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Location Name | Washburn Spring, Yellowstone National Park, Wyoming, USA | |||||||
Coordinates | Lat. (o) | 44.376 | Long. (o) | -110.69 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F074155 | Metagenome | 120 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0209225_10117503 | F074155 | GGA | VWSREDFSHAIPFPESSDDRDYEGHWQPGNTLAFLKGLGDPALANGKGKALMRVLAKSVNRADNLGLRARYIKTLVEWEDPPQLRRVLSRISLLLTQMGQRENWQLANYTGNLARKIVAFKLLTKQPISYKLGDAITAHTIEKLGLKTAASDLKVENEDLQLIQQLENITQKPKRPKPTYQTSPLINSN |
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