Basic Information | |
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Taxon OID | 3300026507 Open in IMG/M |
Scaffold ID | Ga0257165_1108524 Open in IMG/M |
Source Dataset Name | Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-B |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 517 |
Total Scaffold Genes | 1 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
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Not Available | (Source: ) |
Source Dataset Ecosystem |
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Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil → Soil Microbial Communities From H.J. Andrews Experimental Forest, Oregon, United States |
Source Dataset Sampling Location | ||||||||
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Location Name | USA: Oregon | |||||||
Coordinates | Lat. (o) | 44.23 | Long. (o) | -122.22 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
---|---|---|---|
F033971 | Metagenome / Metatranscriptome | 176 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0257165_11085241 | F033971 | N/A | MEIDTRFPTKLNTVSDAPEPLRSALAESLPPGEPVRLLVHAPAFATEEEKSPATVLAVTNNGWLVASETEGGSAAVEKSDFSDTLFLELKSILLSGQLRISFAAVDKSHFVMIKFETVEDQYYREAIDLILAGIDPALS |
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