Basic Information | |
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Taxon OID | 3300026551 Open in IMG/M |
Scaffold ID | Ga0209648_10252926 Open in IMG/M |
Source Dataset Name | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes) |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 1303 |
Total Scaffold Genes | 2 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 1 (50.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria → Acidobacteria | (Source: UniRef50) |
Source Dataset Ecosystem |
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Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil → Grasslands Soil Microbial Communities From The Angelo Coastal Reserve, California, Usa |
Source Dataset Sampling Location | ||||||||
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Location Name | Laytonville, California, USA | |||||||
Coordinates | Lat. (o) | 39.7392 | Long. (o) | -123.6308 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F016714 | Metagenome / Metatranscriptome | 245 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0209648_102529262 | F016714 | AGGAG | MSRYMNLRFALPVILSAVLLPAAVFAQSDTQSVAEAARRARAQKKNNEKPAKVITDETLDVKKGDVQSATAEQLRVPGSPETQAQPPAGAAKAPTQGSNNASEDDKTRAALKERVALKEKIKDAESDLDLLQREYKLDQDSFYSSTDYARNTSGKEKLDAMKEQISSKQQELERLKARLAALPPPQEGAATTPKS |
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