Basic Information | |
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Taxon OID | 3300027638 Open in IMG/M |
Scaffold ID | Ga0208612_1004130 Open in IMG/M |
Source Dataset Name | Polar desert microbial communities from Antarctic Dry Valleys - UQ889 (SPAdes) |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 5633 |
Total Scaffold Genes | 6 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 4 (66.67%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter xylanophilus | (Source: IMG/M) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert → Polar Desert Microbial Communities From Antarctic Dry Valleys |
Source Dataset Sampling Location | ||||||||
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Location Name | Antarctic Dry Valleys | |||||||
Coordinates | Lat. (o) | -78.1358 | Long. (o) | 164.1187 | Alt. (m) | Depth (m) | 0 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F060325 | Metagenome | 133 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0208612_10041304 | F060325 | N/A | MLYYDTKLVDTPEGTTGEGDLSFAAFSLSHAACRDDVLEVRIGEHMLLAWCMECAVMEVFAPCED |
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