Basic Information | |
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Taxon OID | 3300027901 Open in IMG/M |
Scaffold ID | Ga0209427_10068520 Open in IMG/M |
Source Dataset Name | Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-1-36_30 (SPAdes) |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 3287 |
Total Scaffold Genes | 7 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 7 (100.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group → Candidatus Levybacteria → Candidatus Levybacteria bacterium RBG_16_35_11 | (Source: UniRef50) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment → Marine Sediment Microbial Communities From White Oak River Estuary, North Carolina |
Source Dataset Sampling Location | ||||||||
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Location Name | White Oak River estuary, North Carolina, USA | |||||||
Coordinates | Lat. (o) | 34.640199 | Long. (o) | -77.109447 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
---|---|---|---|
F089866 | Metagenome | 108 | Y |
Protein ID | Family | RBS | Sequence |
---|---|---|---|
Ga0209427_100685202 | F089866 | GAGG | VALLTLVDGRKGQYDIVVLLTAYNEPLSFAEWLFIGKCYLDSEGSYYPVSEGYIGKAMLLNALNELAHGVDFEKVLNRYRLNRKGRKLNIIDKRRNAISKKSLEKLHEVLTDS |
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