Basic Information | |
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Taxon OID | 3300028190 Open in IMG/M |
Scaffold ID | Ga0257108_1013086 Open in IMG/M |
Source Dataset Name | Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_1000m |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 2450 |
Total Scaffold Genes | 8 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 5 (62.50%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
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Not Available | (Source: ) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine → Marine Microbial Communities From Expanding Oxygen Minimum Zones In The Northeastern Subarctic Pacific Ocean |
Source Dataset Sampling Location | ||||||||
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Location Name | Canada: Northeast Subartic Pacific Ocean | |||||||
Coordinates | Lat. (o) | 50.0 | Long. (o) | -145.0 | Alt. (m) | Depth (m) | 1000 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F055785 | Metagenome | 138 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0257108_10130868 | F055785 | N/A | MGSRYRDSGILFCRMSYIQMKDEWKLFIAWAILVILLLLSGCASSTPKTNEKWSDESITLATTVTGLSMIDAKQTFMMDEYRSYHDRIEPITYAHEVNPLMGDSPTNDRVVVVKLLTGALTLYGLNKMKEENRKKALMYLNVFYMLVVIHNNSLGLNINL |
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