Basic Information | |
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Taxon OID | 3300028414 Open in IMG/M |
Scaffold ID | Ga0228627_1053533 Open in IMG/M |
Source Dataset Name | Seawater microbial communities from Monterey Bay, California, United States - 33D |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 1072 |
Total Scaffold Genes | 3 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium | (Source: UniRef50) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater → Seawater Microbial Communities From Monterey Bay, California, United States |
Source Dataset Sampling Location | ||||||||
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Location Name | USA: California | |||||||
Coordinates | Lat. (o) | 36.8313 | Long. (o) | -121.9047 | Alt. (m) | Depth (m) | 5 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F051536 | Metagenome / Metatranscriptome | 144 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0228627_10535333 | F051536 | N/A | IDNAFELGIPNHISFTLFKYDYFDSIIISRVKKECKNVSQIEGEYVVKKDSFMNAIKTSKRIRSEIQKAESLGYMPNPSVKPNSVYFLCSIFNRLPNLEFLSIKVNDDKKYSRLIKNESGLPILSFHFNILEGIFDLTKLLERKELDLFNKTLIDFNILENKYLNRKPYFYMKATAILDILASMEIEGKLNSFKIVDYIDPKLEEDDPILIVKTDYTPY |
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