Basic Information | |
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Taxon OID | 3300029318 Open in IMG/M |
Scaffold ID | Ga0185543_1079472 Open in IMG/M |
Source Dataset Name | Marine giant viral communities collected during Tara Oceans survey from station TARA_038 - TARA_Y100000289 |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | CEA Genoscope |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 657 |
Total Scaffold Genes | 3 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 1 (33.33%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp. | (Source: UniRef50) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine → Marine Viral And Eukaryotic Protist Communities Collected From Different Water Depths During Tara Oceans Survey |
Source Dataset Sampling Location | ||||||||
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Location Name | Indian Ocean: TARA_038 | |||||||
Coordinates | Lat. (o) | 19.0393 | Long. (o) | 64.4913 | Alt. (m) | Depth (m) | 5 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F062776 | Metagenome / Metatranscriptome | 130 | Y |
Protein ID | Family | RBS | Sequence |
---|---|---|---|
Ga0185543_10794722 | F062776 | AGGAG | MDKYSDPDVFIVLVGFIGIFLVGALLGEVAVWVAKILGYEYEEKPNVDFWQRLQDGEVLDADNMFSNGN |
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