Basic Information | |
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Taxon OID | 3300029933 Open in IMG/M |
Scaffold ID | Ga0119945_1008178 Open in IMG/M |
Source Dataset Name | Aquatic microbial communities from drinking water treatment plant in Pearl River Delta area, China - influent_20120727_2 |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | University of Hong Kong |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 1399 |
Total Scaffold Genes | 7 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 5 (71.43%) |
Novel Protein Genes | 3 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (33.33%) |
Associated Families | 3 |
Taxonomy | |
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Not Available | (Source: ) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Freshwater → Drinking Water → Unclassified → Aquatic → Aquatic Microbial Communities From Drinking Water Treatment Plant In Pearl River Delta Area, China |
Source Dataset Sampling Location | ||||||||
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Location Name | China: Pearl River Delta area | |||||||
Coordinates | Lat. (o) | Long. (o) | Alt. (m) | Depth (m) | .5 | Location on Map | ||
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
---|---|---|---|
F007363 | Metagenome / Metatranscriptome | 352 | Y |
F014129 | Metagenome / Metatranscriptome | 265 | Y |
F103145 | Metagenome / Metatranscriptome | 101 | Y |
Protein ID | Family | RBS | Sequence |
---|---|---|---|
Ga0119945_10081781 | F014129 | N/A | TTLENREITLSNVSADEANLIVCVFCSDYANEIFCGKCNEYKGLMTLGEWLAYTQESWVM |
Ga0119945_10081782 | F103145 | N/A | MLSEKTFNKIVFEYQHGGVKNFHPEISFSERKALLKYLFSIPTHKDCECAK |
Ga0119945_10081784 | F007363 | AGGA | MRGYSIVDLLVDQYYSPTSLRRRFNGGVINFAEKRDDVYPPEGYEAFAIRYRPTGSLKDEWATVAVRVSDY |
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