Basic Information | |
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Taxon OID | 3300030715 Open in IMG/M |
Scaffold ID | Ga0308127_1044909 Open in IMG/M |
Source Dataset Name | Metatranscriptome of marine microbial communities from Western Arctic Ocean, Canada - AG5_1295_SCM (Metagenome Metatranscriptome) |
Source Dataset Category | Metatranscriptome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 545 |
Total Scaffold Genes | 1 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Eukaryota → Sar | (Source: UniRef50) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine → Marine Microbial Communities From Western Arctic Ocean, Canada |
Source Dataset Sampling Location | ||||||||
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Location Name | Canada: Western Arctic Ocean | |||||||
Coordinates | Lat. (o) | 70.5467 | Long. (o) | -122.9077 | Alt. (m) | Depth (m) | 24 | Location on Map |
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Family | Category | Number of Sequences | 3D Structure? |
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F015213 | Metatranscriptome | 256 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0308127_10449091 | F015213 | N/A | GAYPQCAQCPGFVAPDSTPGVMTWDELLEHMDNLVEWGQGEIKGWHSQAAKFLQVSGKSCVANDMTHRLAVQNKLAGICEDMCKEVGAYPQCAQCPGFVAPDSTPGVMTWDELLEHMDNLVEWGQGEIKGWRSQAAKFIQTKEGSCLTNDLKHRSTVQNRLAGICEDMCKEVGAYPQCAQ |
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