Basic Information | |
---|---|
Taxon OID | 3300030935 Open in IMG/M |
Scaffold ID | Ga0075401_11360013 Open in IMG/M |
Source Dataset Name | Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA7 SO (Eukaryote Community Metatranscriptome) |
Source Dataset Category | Metatranscriptome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
---|---|
Scaffold Length (bps) | 525 |
Total Scaffold Genes | 1 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
---|---|
All Organisms → cellular organisms → Eukaryota | (Source: Euk_MAG) |
Source Dataset Ecosystem |
---|
Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil → Forest Soil Microbial Communities From France, Sweden, Spain And Usa, For Metatranscriptomics Studies |
Source Dataset Sampling Location | ||||||||
---|---|---|---|---|---|---|---|---|
Location Name | France: Champenoux | |||||||
Coordinates | Lat. (o) | 48.7184 | Long. (o) | 6.3471 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
---|---|---|---|
F000393 | Metagenome / Metatranscriptome | 1186 | Y |
Protein ID | Family | RBS | Sequence |
---|---|---|---|
Ga0075401_113600131 | F000393 | N/A | ALFASVCLAQNKPNWPNAASATLFINGLERRGDRHLVRWFYDRTGGKERIDGDRDFLGERYFTTTILNTNLKREYFIVHQGSLVLCYYRSSNITIPHPNFTNARYIGKAEIGLNIVDHWIERDPVERRDFLDIFDRVDDGYVVRMDFDDRRRGHVVTLEFHEWDAGVQDPNLFV |
⦗Top⦘ |