Basic Information | |
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Taxon OID | 3300031057 Open in IMG/M |
Scaffold ID | Ga0170834_103713745 Open in IMG/M |
Source Dataset Name | Oak Coassembly Site 11 - Champenoux / Amance forest |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 629 |
Total Scaffold Genes | 1 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Eukaryota | (Source: Euk_MAG) |
Source Dataset Ecosystem |
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Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil → Forest Soil Microbial Communities From France, Sweden, Spain And Usa, For Metatranscriptomics Studies |
Source Dataset Sampling Location | ||||||||
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Location Name | France: Champenoux | |||||||
Coordinates | Lat. (o) | 48.7184 | Long. (o) | 6.3471 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F006831 | Metagenome / Metatranscriptome | 363 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0170834_1037137451 | F006831 | N/A | LPVSLALAAMPQFPLDWSSNQESFLVVKQGDFTIDDKGSFCCPEGSNCQVQTEYQQGIEYFSYSTNQTRFDDDVSSQVIITDYIIGKEMLVQSKSNLTCVEYCPTQFPLESYSLDKTAKDKGPVTIGGKTYEDWYWEEKILVFIVMEKVDVFVDQSDPQNPVPFIEKDEITPFGQDIGTANTTFTNFKPGKQDPSLFAVQGAAHCKMSP |
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