Basic Information | |
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Taxon OID | 3300031255 Open in IMG/M |
Scaffold ID | Ga0315554_1243192 Open in IMG/M |
Source Dataset Name | Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1603-70 |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 580 |
Total Scaffold Genes | 1 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria | (Source: UniRef50) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh Sediment → Salt Marsh Sediment Microbial Communities From The Plum Island Ecosystem Lter, Massachusetts, United States |
Source Dataset Sampling Location | ||||||||
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Location Name | USA: Massachusetts | |||||||
Coordinates | Lat. (o) | 42.759 | Long. (o) | -70.847 | Alt. (m) | Depth (m) | .7 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F063816 | Metagenome | 129 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0315554_12431921 | F063816 | N/A | MESVELKLRLIDNGEFVGRYTKKIVEILGEPEMSLEVKAGQISEDVSRLVESLGYKVTAKRPM |
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