Basic Information | |
---|---|
Taxon OID | 3300031520 Open in IMG/M |
Scaffold ID | Ga0272428_1018997 Open in IMG/M |
Source Dataset Name | Rock endolithic microbial communities from Victoria Land, Antarctica - Finger Mt nord |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
---|---|
Scaffold Length (bps) | 7414 |
Total Scaffold Genes | 9 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 7 (77.78%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
---|---|
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi | (Source: IMG/M) |
Source Dataset Ecosystem |
---|
Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified → Rock → Rock Endolithic Microbial Communities From Victoria Land, Antarctica |
Source Dataset Sampling Location | ||||||||
---|---|---|---|---|---|---|---|---|
Location Name | Antarctica: Victoria Land | |||||||
Coordinates | Lat. (o) | -77.9 | Long. (o) | 161.57 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
---|---|---|---|
F033733 | Metagenome / Metatranscriptome | 176 | Y |
Protein ID | Family | RBS | Sequence |
---|---|---|---|
Ga0272428_10189978 | F033733 | AGG | MTPPAKAGSPLPSTLMADSSLVSRRAWLAGLVSGAGLLAAACGSPGAQVLDTPEGRVLQYEGDNLLVLVSGTQATYRVGDSMHLTLLVNNQSAGYVQVRLRTKLLGRAEQPVVQADPAVLSVKTDDASSVDQDLPLPRDLLPGDYTLSVEIPPWKLDGRDAGRGATLTAPVRLQPAATT |
⦗Top⦘ |