Basic Information | |
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Taxon OID | 3300031710 Open in IMG/M |
Scaffold ID | Ga0307386_10643906 Open in IMG/M |
Source Dataset Name | Metatranscriptome of marine eukaryotic phytoplankton communities from South Atlantic Ocean ? PS103-2.R3 (Eukaryote Community Metatranscriptome) |
Source Dataset Category | Metatranscriptome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 564 |
Total Scaffold Genes | 1 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Eukaryota → Sar | (Source: UniRef50) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine → Marine Eukaryotic Phytoplankton Communities From The Norwegian Sea, Arctic And Atlantic Ocean |
Source Dataset Sampling Location | ||||||||
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Location Name | Atlantic Ocean | |||||||
Coordinates | Lat. (o) | -49.0129 | Long. (o) | 2.8377 | Alt. (m) | Depth (m) | 50 | Location on Map |
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Family | Category | Number of Sequences | 3D Structure? |
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F002650 | Metatranscriptome | 539 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0307386_106439061 | F002650 | N/A | LRLSDVPSHPKLAAMQVTLFAVALLVVGASASNFRTAPDVTAEVQREEMQNIQIHDGFAAQEQNDAQNLNEVKANQDLSQLQTDSSQWLVALDRDLKTKMLVQKVKGIKDPCAGITCAANLKCPAGFSVTEVEGHCCSYCVNPNIKLEAAITGATGSNGGKASTFCPKVWCFPTACTKAPSNPTTTNS |
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