Basic Information | |
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Taxon OID | 3300032251 Open in IMG/M |
Scaffold ID | Ga0316198_10055391 Open in IMG/M |
Source Dataset Name | Coastal sediment microbial communities from Oude Bieten Haven, Netherlands - site A anoxic |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 2388 |
Total Scaffold Genes | 4 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 3 (75.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria → Proteobacteria | (Source: UniRef50) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Coastal → Sediment → Sediment → Sediment Chemolithoautotrophic Microbial Communities From Various Locations |
Source Dataset Sampling Location | ||||||||
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Location Name | Netherlands | |||||||
Coordinates | Lat. (o) | 51.4666 | Long. (o) | 4.071 | Alt. (m) | Depth (m) | 0 | Location on Map |
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Family | Category | Number of Sequences | 3D Structure? |
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F040633 | Metagenome / Metatranscriptome | 161 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0316198_100553913 | F040633 | GGA | MSGSGVRRAKAAFLSGCKSHPAILLQPEAIGAVMEATKWLKPSV |
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