Basic Information | |
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Taxon OID | 3300032258 Open in IMG/M |
Scaffold ID | Ga0316191_10351264 Open in IMG/M |
Source Dataset Name | Coastal sediment microbial communities from Maine, United States - Eddy worm burrow 2 cm |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 1073 |
Total Scaffold Genes | 2 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 2 (100.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria | (Source: UniRef50) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Coastal → Sediment → Worm Burrow → Sediment Chemolithoautotrophic Microbial Communities From Various Locations |
Source Dataset Sampling Location | ||||||||
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Location Name | USA: Maine | |||||||
Coordinates | Lat. (o) | 43.9948 | Long. (o) | -69.6486 | Alt. (m) | Depth (m) | 0 | Location on Map |
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Family | Category | Number of Sequences | 3D Structure? |
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F105195 | Metagenome | 100 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0316191_103512641 | F105195 | AGGAGG | MTVLLIWSLADIQSPCIITSDKRVIDLSETDPAIWASYISEENKRRVLAAVRRWETAVTAGADATEAYGYAIGGIGVDFLTWRTNERA |
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