Basic Information | |
---|---|
Taxon OID | 3300032515 Open in IMG/M |
Scaffold ID | Ga0348332_12469727 Open in IMG/M |
Source Dataset Name | FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data) |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
---|---|
Scaffold Length (bps) | 932 |
Total Scaffold Genes | 2 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 1 (50.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
---|---|
Not Available | (Source: ) |
Source Dataset Ecosystem |
---|
Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter → Soil, Plant Litter And Rhizosphere Microbial Communities From European Coniferous Forests |
Source Dataset Sampling Location | ||||||||
---|---|---|---|---|---|---|---|---|
Location Name | Czech Republic: South Bohemian Region | |||||||
Coordinates | Lat. (o) | 49.0431 | Long. (o) | 13.617 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
---|---|---|---|
F018222 | Metagenome / Metatranscriptome | 236 | Y |
Protein ID | Family | RBS | Sequence |
---|---|---|---|
Ga0348332_124697272 | F018222 | AGGAG | MAGDPRKTWKYFAQAVIQEEDPEKLTYLMQELYSMLKDSQEQPSRT |
⦗Top⦘ |