Basic Information | |
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Taxon OID | 3300032651 Open in IMG/M |
Scaffold ID | Ga0314685_10777305 Open in IMG/M |
Source Dataset Name | Metatranscriptome of seawater microbial communities from Espelandsvegen Fjord, Bergen, Norway - Red4_26May_surf (Eukaryote Community Metatranscriptome) |
Source Dataset Category | Metatranscriptome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 510 |
Total Scaffold Genes | 1 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Isochrysidales → Noelaerhabdaceae → Emiliania → Emiliania huxleyi | (Source: IMG/M) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater → Seawater Microbial Communities From Espelandsvegen Fjord, Bergen, Norway |
Source Dataset Sampling Location | ||||||||
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Location Name | Norway: Bergen | |||||||
Coordinates | Lat. (o) | 60.2696 | Long. (o) | 5.2187 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F055396 | Metatranscriptome | 138 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0314685_107773051 | F055396 | N/A | LKPEEAQVTILAPSSCHRASTSKMKFSALLAFTLAVTAQAVLVNSSTKLDINQKVYIENAPVLGDGAGEGALGGCHMFAPQHIANPAAPTVKVCGTGIKTTIFLRQRCKEYYTHSKVIGKCDSKMPASTCEEMSAAGDPHIGAYQSYMIEQC |
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