Basic Information | |
---|---|
Taxon OID | 3300033433 Open in IMG/M |
Scaffold ID | Ga0326726_11162350 Open in IMG/M |
Source Dataset Name | Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
---|---|
Scaffold Length (bps) | 750 |
Total Scaffold Genes | 2 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Novel Protein Genes | 2 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 2 |
Taxonomy | |
---|---|
All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | (Source: UniRef50) |
Source Dataset Ecosystem |
---|
Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil → Lab Enriched Peat Soil Microbial Communities From Two Peatlands Near Ithaca, Ny, United States |
Source Dataset Sampling Location | ||||||||
---|---|---|---|---|---|---|---|---|
Location Name | USA: New York | |||||||
Coordinates | Lat. (o) | 42.3286 | Long. (o) | -76.4792 | Alt. (m) | Depth (m) | 0 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
---|---|---|---|
F014531 | Metagenome / Metatranscriptome | 262 | Y |
F104532 | Metagenome | 100 | Y |
Protein ID | Family | RBS | Sequence |
---|---|---|---|
Ga0326726_111623501 | F104532 | N/A | MTPTLIWIDEPENNGWACSICSWKFPVPTFLSDPEAQRAYDRLAALKFRDHVCEIAVPPKEVEDTSTEPTFNKRVMKLIKVGYKPKDAAEIALDEIALEHRNDPNVMAKARADAKDFLQRVREGRI |
Ga0326726_111623502 | F014531 | N/A | RLTTEAEELKRTQNSPSIWKLHADSLVVLLDLAKKVAEAVDRLALQTAQQEDMQARGDVLRLSLDKLHERTDQVVKILAPA |
⦗Top⦘ |