Basic Information | |
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Taxon OID | 3300033572 Open in IMG/M |
Scaffold ID | Ga0307390_11050195 Open in IMG/M |
Source Dataset Name | Metatranscriptome of marine eukaryotic phytoplankton communities from South Atlantic Ocean ? PS103-4.R1 (Eukaryote Community Metatranscriptome) |
Source Dataset Category | Metatranscriptome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 517 |
Total Scaffold Genes | 1 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Gymnoplea → Calanoida → Pseudodiaptomidae → Pseudodiaptomus → Pseudodiaptomus poplesia | (Source: UniRef50) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine → Marine Eukaryotic Phytoplankton Communities From The Norwegian Sea, Arctic And Atlantic Ocean |
Source Dataset Sampling Location | ||||||||
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Location Name | Atlantic Ocean | |||||||
Coordinates | Lat. (o) | -55.8778 | Long. (o) | 1.056 | Alt. (m) | Depth (m) | 24 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F001694 | Metatranscriptome | 650 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0307390_110501951 | F001694 | N/A | KADQTKHKMQFLVLLAAIGCASAASSNAVTCDECQAGAAGLVDHLLSEDSLAEQGEILKAVVCPATPDPESCAANVDMWFPDMASCIYNHFVIESDVCSRLGLCKKAAIFTPRDWTCEECTDVLARTAAYMSDEATIAEGVEYLSGDCFCGAGGHSDDCPDVVSGLLPIAMP |
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