Basic Information | |
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Taxon OID | 3300034004 Open in IMG/M |
Scaffold ID | Ga0334926_001757 Open in IMG/M |
Source Dataset Name | Biocrust microbial communities from Mojave Desert, California, United States - 22HNC |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 7404 |
Total Scaffold Genes | 5 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 3 (60.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria | (Source: IMG/M) |
Source Dataset Ecosystem |
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Environmental → Terrestrial → Soil → Soil Crust → Unclassified → Hypolithic Biocrust → Soil And Biocrust Microbial Communities From Mojave Desert, California, United States |
Source Dataset Sampling Location | ||||||||
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Location Name | USA: California | |||||||
Coordinates | Lat. (o) | 34.3778 | Long. (o) | -117.6098 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F007252 | Metagenome / Metatranscriptome | 354 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0334926_001757_1655_1993 | F007252 | GAG | MKKSKQKSKDGRGGARPGAGGGCRWKHGRTKLVRLPVALLDEILEVARYMDQNEGRLPSSAPPVIISGHPSESLSGEELEEFFAKKKAQKLAEQVMRGDEWVLVSDETFAGF |
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