Basic Information | |
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Taxon OID | 3300034172 Open in IMG/M |
Scaffold ID | Ga0334913_065490 Open in IMG/M |
Source Dataset Name | Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 9HMS |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 766 |
Total Scaffold Genes | 2 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | (Source: UniRef50) |
Source Dataset Ecosystem |
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Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil → Soil And Biocrust Microbial Communities From Mojave Desert, California, United States |
Source Dataset Sampling Location | ||||||||
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Location Name | USA: California | |||||||
Coordinates | Lat. (o) | 34.7856 | Long. (o) | -115.66 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F055613 | Metagenome | 138 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0334913_065490_372_743 | F055613 | N/A | VKPGNRETIPTISEAVREATAIVDPEGTDTAVIGFFESFEDDDRPTTAAEDLRGELLSTVQGIDPEGDDPAAQAAAAAAFWLATNPSQANNGDHVLREGVRLTFEGNPPEALAEWLAARGVEL |
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