Basic Information | |
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Taxon OID | 3300034629 Open in IMG/M |
Scaffold ID | Ga0326756_017238 Open in IMG/M |
Source Dataset Name | Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 543_2600 |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 838 |
Total Scaffold Genes | 3 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 2 (66.67%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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Not Available | (Source: ) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Unclassified → Unclassified → Filtered Seawater → Extreme Environments Viral Communities From Various Locations |
Source Dataset Sampling Location | ||||||||
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Location Name | Atlantic Ocean | |||||||
Coordinates | Lat. (o) | 14.7528 | Long. (o) | -44.9788 | Alt. (m) | Depth (m) | 2600 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F058080 | Metagenome / Metatranscriptome | 135 | N |
Protein ID | Family | RBS | Sequence |
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Ga0326756_017238_74_451 | F058080 | GGAG | MSDEEWLYHSPDAWTKVLDDQDNAQGWAHQQQLEEQQMAFKHDEGRGSGWTNESDNPKAPKLKGSMCWKGEQINWALWKNVKKKDTDPDWGLKLEEPREQKFSPEASGPDRSWSKPKKEEDDFPF |
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